Biochemistry & Biophysics

Tatyana Igumenova

igumenova Assistant Professor of Biochemistry and Biophysics

Phone: (979) 845-6312
Email: tigumenova@tamu.edu
Ph.D. Columbia University, 2003
Postdoc. University of Pennsylvania, 2003-2005
Postdoc. Columbia University, 2005-2007
Igumenova Lab Website
Joined Texas A&M Faculty 2008

Protein Dynamics and NMR


The importance of Nuclear Magnetic Resonance (NMR) methods in structural biology is illustrated by the rapidly growing number of three-dimensional NMR structures in the Protein Data Bank. While well-folded soluble proteins make up the majority of these structures, membrane-associated, partially folded, aggregated, and heterogeneous protein systems are also amenable to solution and solid-state NMR studies. In addition to structural data, NMR is able to provide site-resolved information on dynamical processes that occur on the timescale from seconds to picoseconds. In particular, NMR relaxation techniques for the characterization of dynamical processes on the microsecond-to-millisecond timescale provide a powerful tool for the investigation of protein folding, catalysis, ligand binding, and allosteric phenomena.

Our laboratory uses advanced solid-state and solution NMR techniques to explore the structure and dynamics of membrane-associated proteins and to investigate the role of conformational dynamics in enzymatic catalysis and protein-protein recognition. Protein systems of interest include (i) lipid-binding domains of Protein Kinase C (PKC) isoenzymes, whose role in cell proliferation, apoptosis, and cancer progression has made them an important therapeutic target, and (ii) Rab GTPases, which serve as primary regulators of intracellular vesicle trafficking by cycling between their GDP-bound (inactive) and GTP-bound (active) states.


Recent Publications


  1. Li X, Lu C, Stewart M, Xu H, Strong RK, Igumenova T & Li P (2009) Structural basis of double-stranded RNA recognition by the RIG-I like receptor MDA5. Arch Biochem Biophys 488: 23-33
  2. Igumenova TI, Brath U, Akke M & Palmer AG 3rd (2007) Characterization of chemical exchange using residual dipolar coupling. J Am Chem Soc 129: 13396-7
  3. Berlow RB, Igumenova TI & Loria JP (2007) Value of a hydrogen bond in triosephosphate isomerase loop motion. Biochemistry 46: 6001-10
  4. Igumenova TI & Palmer AG 3rd (2006) Off-resonance TROSY-selected R 1rho experiment with improved sensitivity for medium- and high-molecular-weight proteins. J Am Chem Soc 128: 8110-1
  5. Igumenova TI, Frederick KK & Wand AJ (2006) Characterization of the fast dynamics of protein amino acid side chains using NMR relaxation in solution. Chem Rev 106: 1672-99
  6. Igumenova TI, Lee AL & Wand AJ (2005) Backbone and side chain dynamics of mutant calmodulin-peptide complexes. Biochemistry 44: 12627-39
  7. Igumenova TI & McDermott AE (2005) Homo-nuclear 13C J-decoupling in uniformly 13C-enriched solid proteins. J Magn Reson 175: 11-20
  8. Wang T, Frederick KK, Igumenova TI, Wand AJ & Zuiderweg ER (2005) Changes in calmodulin main-chain dynamics upon ligand binding revealed by cross-correlated NMR relaxation measurements. J Am Chem Soc 127: 828-9
  9. Igumenova TI, McDermott AE, Zilm KW, Martin RW, Paulson EK & Wand AJ (2004) Assignments of carbon NMR resonances for microcrystalline ubiquitin. J Am Chem Soc 126: 6720-7
  10. Igumenova TI, Wand AJ & McDermott AE (2004) Assignment of the backbone resonances for microcrystalline ubiquitin. J Am Chem Soc 126: 5323-31
  11. Igumenova TI & McDermott AE (2003) Improvement of resolution in solid state NMR spectra with J-decoupling: an analysis of lineshape contributions in uniformly 13C-enriched amino acids and proteins. J Magn Reson 164: 270-85
  12. Igumenova TI, Mitchell DJ & Evans JN (1997) Comparative studies of phase-cycling schemes for multiple pi-pulse sequences. J Magn Reson 127: 144-6
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